>>> Building on exopi-3 under math/arpack BDEPENDS = [lang/gcc/8;devel/ninja;devel/openmpi;devel/cmake;math/lapack;lang/gcc/8,-f95] DIST = [math/arpack,-mpi:arpack-ng-3.8.0.tar.gz] FULLPKGNAME = arpack-3.8.0p2v0 RDEPENDS = [math/lapack] (Junk lock obtained for exopi-3 at 1731879791.12) >>> Running depends in math/arpack at 1731879791.17 last junk was in security/cyrus-sasl2,sqlite3 /usr/sbin/pkg_add -aI -Drepair g95-8.4.0p25 gcc-8.4.0p25 lapack-3.12.0 openmpi-4.1.6 was: /usr/sbin/pkg_add -aI -Drepair cmake-3.30.5v1 g95-8.4.0p25 gcc-8.4.0p25 lapack-3.12.0 ninja-1.11.1p0v0 openmpi-4.1.6 /usr/sbin/pkg_add -aI -Drepair g95-8.4.0p25 gcc-8.4.0p25 lapack-3.12.0 openmpi-4.1.6 New and changed readme(s): /usr/local/share/doc/pkg-readmes/openmpi >>> Running show-prepare-results in math/arpack at 1731879800.52 ===> math/arpack ===> Building from scratch arpack-3.8.0 ===> arpack-3.8.0p2v0 depends on: cmake-* -> cmake-3.30.5v1 ===> arpack-3.8.0p2v0 depends on: ninja-* -> ninja-1.11.1p0v0 ===> arpack-3.8.0p2v0 depends on: gcc->=8,<9 -> gcc-8.4.0p25 ===> arpack-3.8.0p2v0 depends on: g95->=8,<9 -> g95-8.4.0p25 ===> arpack-3.8.0p2v0 depends on: lapack-* -> lapack-3.12.0 ===> arpack-3.8.0p2v0 depends on: openmpi-* -> openmpi-4.1.6 ===> Verifying specs: lapack blas m gfortran>=8 quadmath lapack blas m gfortran>=8 quadmath arpack execinfo pciaccess pthread util z mpi mpi_mpifh mpi_usempi_ignore_tkr mpi_usempif08 open-pal open-rte ===> found lapack.7.1 blas.2.1 m.10.1 gfortran.8.0 quadmath.3.0 arpack.2.0 execinfo.3.0 pciaccess.2.1 pthread.27.1 util.18.0 z.7.1 mpi.9.0 mpi_mpifh.3.0 mpi_usempi_ignore_tkr.3.0 mpi_usempif08.5.0 open-pal.9.0 open-rte.9.0 cmake-3.30.5v1 g95-8.4.0p25 gcc-8.4.0p25 lapack-3.12.0 ninja-1.11.1p0v0 openmpi-4.1.6 (Junk lock released for exopi-3 at 1731879802.29) distfiles size=1014494 >>> Running build in math/arpack at 1731879802.32 ===> math/arpack ===> Checking files for arpack-3.8.0 `/exopi-cvs/ports/distfiles/arpack-ng-3.8.0.tar.gz' is up to date. >> (SHA256) all files: OK ===> Extracting for arpack-3.8.0 ===> Patching for arpack-3.8.0 ===> Applying OpenBSD patch patch-CMakeLists_txt Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |Setup for openmpi tests. | |Index: CMakeLists.txt |--- CMakeLists.txt.orig |+++ CMakeLists.txt -------------------------- Patching file CMakeLists.txt using Plan A... Hunk #1 succeeded at 663. done ===> Compiler link: gcc -> /usr/local/bin/egcc ===> Compiler link: cc -> /usr/local/bin/egcc ===> Compiler link: gfortran -> /usr/local/bin/egfortran ===> Compiler link: clang -> /usr/bin/clang ===> Compiler link: clang++ -> /usr/bin/clang++ ===> Compiler link: c++ -> /usr/bin/c++ ===> Generating configure for arpack-3.8.0 ===> Configuring for arpack-3.8.0 CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 8.4.0 -- The Fortran compiler identification is GNU 8.4.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /exopi-obj/pobj/arpack-3.8.0/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /exopi-obj/pobj/arpack-3.8.0/bin/gfortran - skipped -- The CXX compiler identification is Clang 16.0.6 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /exopi-obj/pobj/arpack-3.8.0/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Fortran compiler does support iso_c_binding. -- Looking for Fortran sgemm -- Looking for Fortran sgemm - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Found BLAS: /usr/local/lib/libblas.so.2.1 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") -- Found MPI_C: /usr/local/lib/libmpi.so.9.0 (found version "3.1") -- Found MPI_CXX: /usr/local/lib/libmpi.so.9.0 (found version "3.1") -- Found MPI_Fortran: /usr/local/lib/libmpi_usempif08.so.5.0 (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Looking for MPI_Comm_c2f -- Looking for MPI_Comm_c2f - not found -- Looking for Fortran cheev -- Looking for Fortran cheev - not found -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- Found LAPACK: /usr/local/lib/liblapack.so.7.1;/usr/local/lib/libblas.so.2.1 -- Configuration summary for arpack-ng-3.8.0: -- prefix: /usr/local -- MPI: ON -- ICB: ON -- INTERFACE64: 0 -- FC: /exopi-obj/pobj/arpack-3.8.0/bin/gfortran -- FCFLAGS: -- CC: /exopi-obj/pobj/arpack-3.8.0/bin/cc -- CCFLAGS: -DNDEBUG -O2 -pipe -- CXX: /exopi-obj/pobj/arpack-3.8.0/bin/c++ -- CXXFLAGS: -DNDEBUG -O2 -pipe -- MPIFC: -- compile: /usr/local/include -- compile: /usr/local/lib -- link: /usr/local/lib/libmpi_usempif08.so.5.0 -- link: /usr/local/lib/libmpi_usempi_ignore_tkr.so.3.0 -- link: /usr/local/lib/libmpi_mpifh.so.3.0 -- link: /usr/local/lib/libmpi.so.9.0 -- link: /usr/local/lib/libopen-rte.so.9.0 -- link: /usr/local/lib/libopen-pal.so.9.0 -- link: /usr/lib/libm.so.10.1 -- link: /usr/X11R6/lib/libpciaccess.so.2.1 -- link: /usr/lib/libexecinfo.so.3.0 -- link: /usr/lib/libutil.so.18.0 -- link: /usr/lib/libz.so.7.1 -- MPICC: -- compile: /usr/local/include -- link: /usr/local/lib/libmpi.so.9.0 -- link: /usr/local/lib/libopen-rte.so.9.0 -- link: /usr/local/lib/libopen-pal.so.9.0 -- link: /usr/lib/libm.so.10.1 -- link: /usr/X11R6/lib/libpciaccess.so.2.1 -- link: /usr/lib/libexecinfo.so.3.0 -- link: /usr/lib/libutil.so.18.0 -- link: /usr/lib/libz.so.7.1 -- MPICXX: -- compile: /usr/local/include -- link: /usr/local/lib/libmpi.so.9.0 -- link: /usr/local/lib/libopen-rte.so.9.0 -- link: /usr/local/lib/libopen-pal.so.9.0 -- link: /usr/lib/libm.so.10.1 -- link: /usr/X11R6/lib/libpciaccess.so.2.1 -- link: /usr/lib/libexecinfo.so.3.0 -- link: /usr/lib/libutil.so.18.0 -- link: /usr/lib/libz.so.7.1 -- BLAS: -- link: /usr/local/lib/libblas.so.2.1 -- LAPACK: -- link: /usr/local/lib/liblapack.so.7.1 -- link: BLAS::BLAS -- Configuring done (13.2s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_ASM_COMPILER_AR CMAKE_ASM_COMPILER_RANLIB CMAKE_OBJCXX_COMPILER_AR CMAKE_OBJCXX_COMPILER_RANLIB CMAKE_OBJC_COMPILER_AR CMAKE_OBJC_COMPILER_RANLIB -- 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CMakeFiles/icb_arpack_cpp.dir/TESTS/icb_arpack_cpp.cpp.o.d -o CMakeFiles/icb_arpack_cpp.dir/TESTS/icb_arpack_cpp.cpp.o -c /exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/TESTS/icb_arpack_cpp.cpp [372/376] : && /exopi-obj/pobj/arpack-3.8.0/bin/c++ -O2 -pipe -DNDEBUG CMakeFiles/icb_arpack_cpp.dir/TESTS/icb_arpack_cpp.cpp.o -o TESTS/icb_arpack_cpp -Wl,-z,origin,-rpath,/exopi-obj/pobj/arpack-3.8.0/build-amd64/lib:/usr/local/lib lib/libarpack.so.2.0 /usr/local/lib/libblas.so.2.1 /usr/local/lib/liblapack.so.7.1 -Wl,-rpath-link,/usr/X11R6/lib:/usr/local/lib && : [373/376] /exopi-obj/pobj/arpack-3.8.0/bin/cc -I/exopi-obj/pobj/arpack-3.8.0/build-amd64 -I/exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0 -I/exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/ICB -I/exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/MPI::MPI_C -isystem /usr/local/include -isystem /usr/local/lib -O2 -pipe -DNDEBUG -pthread -MD -MT CMakeFiles/icb_parpack_c.dir/PARPACK/TESTS/MPI/icb_parpack_c.c.o -MF 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-Wl,-rpath-link,/usr/X11R6/lib && : [375/376] /exopi-obj/pobj/arpack-3.8.0/bin/c++ -I/exopi-obj/pobj/arpack-3.8.0/build-amd64 -I/exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0 -I/exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/ICB -I/exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/MPI::MPI_CXX -isystem /usr/local/include -isystem /usr/local/lib -O2 -pipe -DNDEBUG -std=gnu++11 -pthread -MD -MT CMakeFiles/icb_parpack_cpp.dir/PARPACK/TESTS/MPI/icb_parpack_cpp.cpp.o -MF CMakeFiles/icb_parpack_cpp.dir/PARPACK/TESTS/MPI/icb_parpack_cpp.cpp.o.d -o CMakeFiles/icb_parpack_cpp.dir/PARPACK/TESTS/MPI/icb_parpack_cpp.cpp.o -c /exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/PARPACK/TESTS/MPI/icb_parpack_cpp.cpp [376/376] : && /exopi-obj/pobj/arpack-3.8.0/bin/c++ -O2 -pipe -DNDEBUG -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -pthread CMakeFiles/icb_parpack_cpp.dir/PARPACK/TESTS/MPI/icb_parpack_cpp.cpp.o -o PARPACK/TESTS/MPI/icb_parpack_cpp -Wl,-z,origin,-rpath,/exopi-obj/pobj/arpack-3.8.0/build-amd64/lib:/usr/local/lib:/usr/X11R6/lib lib/libparpack.so.1.0 lib/libarpack.so.2.0 /usr/local/lib/libblas.so.2.1 /usr/local/lib/liblapack.so.7.1 /usr/local/lib/libmpi_usempif08.so.5.0 /usr/local/lib/libmpi_usempi_ignore_tkr.so.3.0 /usr/local/lib/libmpi_mpifh.so.3.0 /usr/local/lib/libmpi.so.9.0 /usr/local/lib/libopen-rte.so.9.0 /usr/local/lib/libopen-pal.so.9.0 /usr/lib/libm.so.10.1 /usr/X11R6/lib/libpciaccess.so.2.1 /usr/lib/libexecinfo.so.3.0 /usr/lib/libutil.so.18.0 /usr/lib/libz.so.7.1 -Wl,-rpath-link,/usr/X11R6/lib:/usr/local/lib && : >>> Running package in math/arpack at 1731879863.87 ===> math/arpack ===> Faking installation for arpack-3.8.0 -- Install configuration: "Release" -- Installing: /exopi-obj/pobj/arpack-3.8.0/fake-amd64/usr/local/lib/libarpack.so.2.0 -- Installing: /exopi-obj/pobj/arpack-3.8.0/fake-amd64/usr/local/lib/pkgconfig/arpack.pc -- Installing: 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/exopi-obj/pobj/arpack-3.8.0/bin/install -d -m 755 /exopi-obj/pobj/arpack-3.8.0/fake-amd64/usr/local/share/examples/arpack/COMPLEX /exopi-obj/pobj/arpack-3.8.0/bin/install -c -m 644 /exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/EXAMPLES/COMPLEX/* /exopi-obj/pobj/arpack-3.8.0/fake-amd64/usr/local/share/examples/arpack/COMPLEX /exopi-obj/pobj/arpack-3.8.0/bin/install -d -m 755 /exopi-obj/pobj/arpack-3.8.0/fake-amd64/usr/local/share/examples/arpack/NONSYM /exopi-obj/pobj/arpack-3.8.0/bin/install -c -m 644 /exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/EXAMPLES/NONSYM/* /exopi-obj/pobj/arpack-3.8.0/fake-amd64/usr/local/share/examples/arpack/NONSYM /exopi-obj/pobj/arpack-3.8.0/bin/install -d -m 755 /exopi-obj/pobj/arpack-3.8.0/fake-amd64/usr/local/share/examples/arpack/SIMPLE /exopi-obj/pobj/arpack-3.8.0/bin/install -c -m 644 /exopi-obj/pobj/arpack-3.8.0/arpack-ng-3.8.0/EXAMPLES/SIMPLE/* /exopi-obj/pobj/arpack-3.8.0/fake-amd64/usr/local/share/examples/arpack/SIMPLE 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