>>> Building on exopi-3 under biology/p5-Bio-ASN1-EntrezGene DIST = [biology/p5-Bio-ASN1-EntrezGene:Bio-ASN1-EntrezGene-1.73.tar.gz] FULLPKGNAME = p5-Bio-ASN1-EntrezGene-1.73v0 RDEPENDS = [biology/bioperl;biology/p5-Bio-Cluster] distfiles size=157307 >>> Running build in biology/p5-Bio-ASN1-EntrezGene at 1714462041.83 ===> biology/p5-Bio-ASN1-EntrezGene ===> Building from scratch p5-Bio-ASN1-EntrezGene-1.73v0 ===> Checking files for p5-Bio-ASN1-EntrezGene-1.73v0 `/exopi-cvs/ports/distfiles/Bio-ASN1-EntrezGene-1.73.tar.gz' is up to date. >> (SHA256) Bio-ASN1-EntrezGene-1.73.tar.gz: OK ===> Extracting for p5-Bio-ASN1-EntrezGene-1.73v0 ===> Patching for p5-Bio-ASN1-EntrezGene-1.73v0 ===> Compiler link: clang -> /usr/bin/clang ===> Compiler link: clang++ -> /usr/bin/clang++ ===> Compiler link: cc -> /usr/bin/cc ===> Compiler link: c++ -> /usr/bin/c++ ===> Generating configure for p5-Bio-ASN1-EntrezGene-1.73v0 ===> Configuring for p5-Bio-ASN1-EntrezGene-1.73v0 Warning: prerequisite Bio::Annotation::Comment 0 not found. Warning: prerequisite Bio::Annotation::DBLink 0 not found. Warning: prerequisite Bio::Annotation::OntologyTerm 0 not found. Warning: prerequisite Bio::Annotation::Reference 0 not found. Warning: prerequisite Bio::Annotation::SimpleValue 0 not found. Warning: prerequisite Bio::Cluster::SequenceFamily 0 not found. Warning: prerequisite Bio::Index::AbstractSeq 0 not found. Warning: prerequisite Bio::Ontology::Term 0 not found. Warning: prerequisite Bio::Root::Test 0 not found. Warning: prerequisite Bio::Seq 0 not found. Warning: prerequisite Bio::SeqFeature::Gene::Exon 0 not found. Warning: prerequisite Bio::SeqFeature::Gene::GeneStructure 0 not found. Warning: prerequisite Bio::SeqFeature::Gene::Transcript 0 not found. Warning: prerequisite Bio::SeqFeature::Generic 0 not found. Warning: prerequisite Bio::SeqIO 0 not found. Warning: prerequisite Bio::Species 0 not found. Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::ASN1::EntrezGene Writing MYMETA.yml and MYMETA.json ===> Building for p5-Bio-ASN1-EntrezGene-1.73v0 cp lib/Bio/ASN1/Sequence.pm blib/lib/Bio/ASN1/Sequence.pm cp lib/Bio/ASN1/Sequence/Indexer.pm blib/lib/Bio/ASN1/Sequence/Indexer.pm cp lib/Bio/SeqIO/entrezgene.pm blib/lib/Bio/SeqIO/entrezgene.pm cp lib/Bio/ASN1/EntrezGene.pm blib/lib/Bio/ASN1/EntrezGene.pm cp lib/Bio/ASN1/EntrezGene/Indexer.pm blib/lib/Bio/ASN1/EntrezGene/Indexer.pm Manifying 5 pod documents >>> Running package in biology/p5-Bio-ASN1-EntrezGene at 1714462046.50 ===> biology/p5-Bio-ASN1-EntrezGene ===> Faking installation for p5-Bio-ASN1-EntrezGene-1.73v0 Manifying 5 pod documents Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/libdata/perl5/site_perl/Bio/ASN1/Sequence.pm Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/libdata/perl5/site_perl/Bio/ASN1/EntrezGene.pm Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/libdata/perl5/site_perl/Bio/ASN1/Sequence/Indexer.pm Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/libdata/perl5/site_perl/Bio/ASN1/EntrezGene/Indexer.pm Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/libdata/perl5/site_perl/Bio/SeqIO/entrezgene.pm Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/man/man3p/Bio::ASN1::EntrezGene.3p Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/man/man3p/Bio::ASN1::EntrezGene::Indexer.3p Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/man/man3p/Bio::ASN1::Sequence.3p Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/man/man3p/Bio::ASN1::Sequence::Indexer.3p Installing /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/man/man3p/Bio::SeqIO::entrezgene.3p Appending installation info to /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/./libdata/perl5/amd64-openbsd/perllocal.pod /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/bin/install -d -m 755 /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/share/examples/p5-Bio-ASN1-EntrezGene; cd /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/Bio-ASN1-EntrezGene-1.73/examples/ && pax -rw . /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/share/examples/p5-Bio-ASN1-EntrezGene; chown -R root:bin /exopi-obj/pobj/p5-Bio-ASN1-EntrezGene-1.73/fake-amd64/usr/local/share/examples/p5-Bio-ASN1-EntrezGene ===> Building package for p5-Bio-ASN1-EntrezGene-1.73v0 Create /exopi-cvs/ports/packages/amd64/no-arch/p5-Bio-ASN1-EntrezGene-1.73v0.tgz Creating package p5-Bio-ASN1-EntrezGene-1.73v0 reading plist| checking dependencies| checking dependencies|biology/bioperl checking dependencies|biology/p5-Bio-Cluster checksumming| checksumming| | 0% checksumming|** | 4% checksumming|***** | 7% checksumming|******* | 11% checksumming|********* | 15% checksumming|*********** | 19% checksumming|************** | 22% checksumming|**************** | 26% checksumming|****************** | 30% checksumming|******************** | 33% checksumming|*********************** | 37% checksumming|************************* | 41% checksumming|*************************** | 44% checksumming|***************************** | 48% checksumming|******************************** | 52% checksumming|********************************** | 56% checksumming|************************************ | 59% checksumming|************************************** | 63% checksumming|***************************************** | 67% checksumming|******************************************* | 70% checksumming|********************************************* | 74% checksumming|*********************************************** | 78% checksumming|************************************************** | 81% checksumming|**************************************************** | 85% checksumming|****************************************************** | 89% checksumming|******************************************************** | 93% checksumming|*********************************************************** | 96% checksumming|*************************************************************|100% archiving| archiving| | 0% archiving|***** | 8% archiving|******** | 13% archiving|************* | 20% archiving|**************** | 24% archiving|****************** | 28% archiving|************************* | 40% archiving|**************************** | 44% archiving|*********************************** | 55% archiving|************************************** | 59% archiving|***************************************************** | 83% archiving|****************************************************** | 84% archiving|*************************************************************** | 99% archiving|****************************************************************|100% Link to /exopi-cvs/ports/packages/amd64/all/p5-Bio-ASN1-EntrezGene-1.73v0.tgz Link to /exopi-cvs/ports/packages/amd64/ftp/p5-Bio-ASN1-EntrezGene-1.73v0.tgz >>> Running clean in biology/p5-Bio-ASN1-EntrezGene at 1714462054.26 ===> biology/p5-Bio-ASN1-EntrezGene ===> Cleaning for p5-Bio-ASN1-EntrezGene-1.73v0 >>> Ended at 1714462055.78 max_stuck=0.00/build=4.54/package=6.81/clean=2.59